Publications and Presentations

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Structural Neuroimaging Genetics Interactions in Alzheimer's Disease., Moon, Seok Woo, Dinov Ivo D., Kim Jaebum, Zamanyan Alen, Hobel Sam, Thompson Paul M., and Toga Arthur W. , J Alzheimers Dis, 2015, Volume 48, Issue 4, p.1051-63, (2015)
MetDisease--connecting metabolites to diseases via literature., Duren, William, Weymouth Terry, Hull Tim, Omenn Gilbert S., Athey Brian, Burant Charles, and Karnovsky Alla , Bioinformatics, 2014 Aug 1, Volume 30, Issue 15, p.2239-41, (2014)
Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data., Karnovsky, Alla, Weymouth Terry, Hull Tim, V Tarcea Glenn, Scardoni Giovanni, Laudanna Carlo, Sartor Maureen A., Stringer Kathleen A., Jagadish H V., Burant Charles, et al. , Bioinformatics, 2012 Feb 1, Volume 28, Issue 3, p.373-80, (2012)
ConceptGen: a gene set enrichment and gene set relation mapping tool., Sartor, Maureen A., Mahavisno Vasudeva, Keshamouni Venkateshwar G., Cavalcoli James, Wright Zachary, Karnovsky Alla, Kuick Rork, Jagadish H V., Mirel Barbara, Weymouth Terry, et al. , Bioinformatics, 2010 Feb 15, Volume 26, Issue 4, p.456-63, (2010)
The gputools package enables GPU computing in R., Buckner, Joshua, Wilson Justin, Seligman Mark, Athey Brian, Watson Stanley, and Meng Fan , Bioinformatics, 2010 Jan 1, Volume 26, Issue 1, p.134-5, (2010)
GSearcher: agile attribute querying for biological networks., Su, Gang, Athey Brian D., and Meng Fan , Bioinformatics, 2010 Dec 15, Volume 26, Issue 24, p.3138-9, (2010)
Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks., Gao, Jing, V Tarcea Glenn, Karnovsky Alla, Mirel Barbara R., Weymouth Terry E., Beecher Christopher W., Cavalcoli James D., Athey Brian D., Omenn Gilbert S., Burant Charles F., et al. , Bioinformatics, 2010 Apr 1, Volume 26, Issue 7, p.971-3, (2010)
MiSearch adaptive pubMed search tool., States, David J., Ade Alex S., Wright Zachary C., Bookvich Aaron V., and Athey Brian D. , Bioinformatics, 2009 Apr 1, Volume 25, Issue 7, p.974-6, (2009)
miBLAST: scalable evaluation of a batch of nucleotide sequence queries with BLAST., Kim, You Jung, Boyd Andrew, Athey Brian D., and Patel Jignesh M. , Nucleic Acids Res, 2005, Volume 33, Issue 13, p.4335-44, (2005)